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A guide to automating human induced pluripotent stem cell culture and sample preparation for 3D live-cell microscopy – Nature Protocols

Title: A Guide to Automating Human Induced Pluripotent Stem Cell Culture and Sample Preparation for 3D Live-Cell Microscopy

Introduction:
Human induced pluripotent stem cells (hiPSCs) hold immense potential for regenerative medicine and disease modeling. To fully harness their capabilities, it is crucial to develop efficient and reproducible methods for their culture and analysis. This article aims to provide a comprehensive guide to automating hiPSC culture and sample preparation for 3D live-cell microscopy, as outlined in the Nature Protocols.

1. Overview of Human Induced Pluripotent Stem Cells:
Human induced pluripotent stem cells are derived from adult somatic cells through reprogramming, acquiring the ability to differentiate into any cell type in the body. Their unique properties make them valuable tools for studying human development, disease mechanisms, and drug discovery.

2. Importance of Automation:
Automating hiPSC culture and sample preparation offers several advantages, including increased reproducibility, reduced variability, enhanced efficiency, and minimized human error. Automation also enables high-throughput experimentation, allowing researchers to analyze large datasets and perform complex experiments.

3. Automation of hiPSC Culture:
a. Robotic Systems: Utilizing robotic systems equipped with specialized liquid handling modules, hiPSC culture can be automated. This includes media exchange, passaging, and monitoring cell growth.
b. Automated Incubators: Maintaining optimal culture conditions is crucial for hiPSCs. Automated incubators provide precise control over temperature, humidity, and gas composition, ensuring consistent growth conditions.

4. Automation of Sample Preparation for 3D Live-Cell Microscopy:
a. Scaffold Generation: Automated systems can fabricate 3D scaffolds using biocompatible materials, providing a suitable environment for hiPSCs to grow and differentiate.
b. Seeding Cells: Automated pipetting systems can precisely seed hiPSCs onto 3D scaffolds, ensuring uniform distribution and minimizing cell loss.
c. Fixation and Staining: Automated protocols for fixation and staining enable consistent and reproducible sample preparation for 3D live-cell microscopy. This includes immunofluorescence staining to visualize specific markers or proteins of interest.

5. Imaging and Analysis:
a. Live-Cell Microscopy: Automated imaging systems equipped with environmental control chambers can capture time-lapse images of hiPSCs in 3D culture, allowing real-time monitoring of cellular dynamics.
b. Image Analysis: Advanced image analysis software can automatically quantify various parameters, such as cell viability, proliferation, migration, and differentiation, providing valuable insights into hiPSC behavior.

6. Considerations and Challenges:
a. Standardization: Developing standardized protocols is essential to ensure reproducibility across different laboratories.
b. Cost and Accessibility: Automation systems can be expensive, limiting their accessibility to some researchers. Collaboration and shared resources can help overcome this challenge.
c. Optimization: Each laboratory may need to optimize automated protocols based on their specific requirements and cell lines.

Conclusion:
Automating hiPSC culture and sample preparation for 3D live-cell microscopy offers numerous benefits, including increased reproducibility, efficiency, and scalability. By following the guidelines provided in the Nature Protocols, researchers can streamline their workflows and obtain reliable data for studying hiPSC behavior and applications in regenerative medicine and disease modeling.

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